Multiple drivers had times deleted in Friday's qualifying, and that continued in the Saturday shootout after the white lines had been moved at Turns 12 and 13 – where many of the offences occurred – in order to protect tyres from kerb damage.
Along with Lance Stroll, Ferrari's Charles Leclerc was one of two drivers to receive a five-second penalty in the sprint event, which in his case dropped him from seventh to 12th in the final classification.
Four drivers received penalties in Sunday's Grand Prix, namely Pierre Gasly, Sergio Perez, Alex Albon and Stroll.
Vasseur insisted that the FIA should learn lessons after regularly experiencing similar problems at the Austrian GP.
"I would say that the biggest issue for me of the weekend is track limits," said the Frenchman.
"Because you know when you are going to Spielberg that you will have issues with track limits, and we had issues with track limits here, and you get the results two hours after the race.
"And when we came before the weekend, we told them exactly the same, that it will be a festival. And it was a festival.
"I think on top of this, the drivers at the end they perhaps lost a little bit of concentration, and some guys, the last 10 laps, they were doing strikes every single lap. But you can't blame them in this situation, we have to find a solution."
Source: Autosport